Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016268.1 Corchorus olitorius cultivar O-4 contig16301, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27267

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
599--928
178
1.9
178
83
5
443
34
13
16
34
1.89
2559--2651
31
3.0
31
73
3
89
36
8
16
38
1.79
10417--10449
6
5.5
6
100
0
66
30
0
0
69
0.88
10813--10875
14
4.5
15
75
11
62
26
12
20
39
1.89
10811--10875
28
2.3
28
91
0
103
27
12
21
38
1.89
12099--12145
15
3.4
15
72
22
57
29
25
17
27
1.97
12094--12147
26
2.1
26
100
0
108
31
27
14
25
1.95
25743--26054
163
1.9
164
88
2
475
20
19
15
45
1.86

Tables:   1

The End!