Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016270.1 Corchorus olitorius cultivar O-4 contig16303, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  44179

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1324--1351
2
14.0
2
100
0
56
50
0
0
50
1.00
1376--1417
19
2.2
19
83
8
50
42
26
2
28
1.67
1410--1450
20
2.0
20
86
9
57
43
19
4
31
1.72
20659--20700
22
1.9
22
85
0
57
19
38
19
23
1.93
21556--21591
13
2.7
13
91
4
54
41
5
0
52
1.24
30276--30313
19
2.0
19
85
10
51
2
23
2
71
1.12
32112--32146
11
3.2
11
83
0
52
77
17
5
0
0.96
39052--39105
22
2.5
22
93
0
90
18
37
37
7
1.79

Tables:   1

The End!