Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016272.1 Corchorus olitorius cultivar O-4 contig16305, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  55300

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2130--2181
23
2.2
23
83
10
61
23
19
26
30
1.98
2889--3024
44
3.0
44
91
3
200
38
10
25
26
1.88
4949--4977
6
5.0
6
95
4
51
13
34
34
17
1.89
6220--6323
47
2.3
46
90
5
158
42
11
21
25
1.86
11561--11601
18
2.4
17
84
8
55
36
2
12
48
1.54
11767--11806
21
2.1
19
86
13
55
20
27
15
37
1.92
12146--12218
30
2.4
30
82
11
96
73
2
10
12
1.19
12155--12240
29
3.2
27
75
15
79
69
2
13
13
1.28
25280--25312
6
5.7
6
92
7
59
30
15
0
54
1.41
29204--29261
21
2.9
19
79
5
62
32
20
10
36
1.87
34399--34439
21
2.0
21
85
0
55
21
29
9
39
1.86
35877--35997
29
4.1
29
71
14
102
26
28
16
28
1.97
45780--45821
2
21.5
2
82
4
50
47
0
7
45
1.30

Tables:   1

The End!