Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016287.1 Corchorus olitorius cultivar O-4 contig16320, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18779

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1788--1844
19
2.9
19
84
5
69
29
24
12
33
1.92
9800--9839
20
2.0
20
100
0
80
20
20
25
35
1.96
11696--11726
2
15.5
2
100
0
62
51
0
0
48
1.00
15933--15994
25
2.6
24
87
5
81
59
4
6
29
1.43
17084--17135
25
2.0
26
96
3
97
40
9
0
50
1.35

Tables:   1

The End!