Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016290.1 Corchorus olitorius cultivar O-4 contig16323, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15415

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--58
31
1.9
31
96
3
109
24
17
13
44
1.85
182--260
29
2.6
32
82
11
96
41
12
15
30
1.84
4867--4920
27
2.0
27
100
0
108
18
14
7
59
1.58
4870--4921
13
3.9
13
90
5
86
17
13
7
61
1.54
9106--9143
20
1.9
20
100
0
76
76
5
7
10
1.15
9076--9150
26
2.7
27
89
8
116
74
5
8
12
1.20
9964--10040
38
2.1
36
86
9
104
23
2
35
38
1.69
10184--10216
17
1.9
17
100
0
66
18
6
6
69
1.30
13688--14307
218
2.9
213
77
4
589
29
16
13
41
1.86

Tables:   1

The End!