Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016299.1 Corchorus olitorius cultivar O-4 contig16332, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15195

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
158--294
31
4.5
31
78
7
136
32
15
11
40
1.83
897--1269
187
2.0
187
99
0
737
33
11
12
42
1.78
1545--1605
31
2.0
30
84
9
79
29
3
11
55
1.51
2526--2592
31
2.2
31
89
5
102
20
20
11
46
1.82
3304--3335
8
4.0
8
95
0
55
25
25
15
34
1.95
12424--12448
12
2.1
12
100
0
50
24
0
0
76
0.80

Tables:   1

The End!