Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016303.1 Corchorus olitorius cultivar O-4 contig16336, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1827

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
394--474
29
2.7
30
88
3
110
28
18
12
40
1.87
559--643
31
2.7
31
96
0
152
45
12
15
25
1.82
558--653
31
3.1
30
86
7
138
43
11
14
30
1.81
1355--1449
50
1.9
50
95
0
172
31
7
0
61
1.24
1707--1799
31
3.0
31
91
1
150
31
12
10
45
1.77

Tables:   1

The End!