Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016304.1 Corchorus olitorius cultivar O-4 contig16337, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25081

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7661--7687
13
2.1
13
100
0
54
40
14
0
44
1.46
10398--10423
12
2.2
12
100
0
52
34
23
7
34
1.83
10991--11027
14
2.4
16
78
21
51
32
32
27
8
1.86
11000--11029
14
2.1
14
100
0
60
26
36
30
6
1.82
11114--11143
14
2.1
14
93
0
51
26
16
0
56
1.40
13222--13308
18
5.2
18
77
12
96
21
12
28
36
1.90
13229--13308
33
2.4
33
100
0
160
21
12
27
38
1.89
13228--13309
15
5.0
16
75
12
78
21
12
26
39
1.89
14839--15720
440
2.0
440
98
0
1719
37
20
13
29
1.90

Tables:   1

The End!