Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016305.1 Corchorus olitorius cultivar O-4 contig16338, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8385

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2024--2093
25
2.8
25
93
0
122
22
17
30
30
1.97
2822--2873
6
8.7
6
77
8
52
21
28
28
21
1.98
2822--2876
18
3.1
18
74
10
58
21
27
27
23
1.99
6077--6189
31
4.1
25
84
13
102
33
14
7
44
1.74
6077--6127
24
2.1
24
92
3
84
31
15
9
43
1.80
6101--6211
31
3.5
31
96
2
195
35
13
7
44
1.71
7148--7189
14
2.8
15
76
23
52
38
33
4
23
1.76

Tables:   1

The End!