Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016307.1 Corchorus olitorius cultivar O-4 contig16340, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31273

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2326--2372
19
2.5
19
75
3
51
40
27
14
17
1.89
2652--2730
27
2.9
27
92
3
124
44
25
13
16
1.85
5410--5500
45
2.0
45
97
0
173
25
10
16
47
1.79
10672--10719
23
2.2
21
79
17
53
35
14
14
35
1.87
15605--15653
23
2.2
22
82
10
64
34
12
16
36
1.86
15643--15685
22
2.0
22
85
0
59
23
11
25
39
1.88
25811--25859
26
1.9
26
84
12
66
55
0
2
42
1.11
30042--30087
22
2.1
22
95
0
83
41
21
8
28
1.83

Tables:   1

The End!