Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016327.1 Corchorus olitorius cultivar O-4 contig16360, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25823

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--2646
330
8.1
331
88
2
3447
34
15
16
33
1.90
1--2646
661
4.0
661
86
3
3424
34
15
16
33
1.90
1984--4442
885
2.8
880
87
5
3321
35
16
14
33
1.89
3631--4767
331
3.5
322
80
9
1079
34
16
14
33
1.89
3965--6002
883
2.3
874
89
3
3080
35
16
14
33
1.89
6016--6707
322
2.2
313
85
4
917
34
16
16
32
1.91
7166--7225
29
2.1
29
87
6
86
63
5
8
23
1.42
22275--22316
22
1.9
22
85
9
59
33
23
4
38
1.76

Tables:   1

The End!