Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016332.1 Corchorus olitorius cultivar O-4 contig16365, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  51585

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3165--3240
40
1.9
40
86
10
111
48
10
7
32
1.66
7194--7232
3
13.0
3
88
0
60
30
64
0
5
1.15
18618--18662
22
2.0
24
86
8
67
42
4
0
53
1.21
18826--18883
19
2.9
19
87
5
80
29
22
12
36
1.90
21710--21812
48
2.1
49
85
8
138
36
0
8
53
1.39
44897--45074
36
4.9
36
88
0
230
14
12
32
41
1.83
45895--45921
2
13.5
2
100
0
54
51
0
0
48
1.00
45923--45950
2
14.0
2
100
0
56
50
50
0
0
1.00
51202--51235
2
17.0
2
100
0
68
50
0
0
50
1.00

Tables:   1

The End!