Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016333.1 Corchorus olitorius cultivar O-4 contig16366, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  47187

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
29--96
24
2.6
27
79
18
88
30
17
7
44
1.76
3031--3093
2
32.5
2
83
15
80
47
1
1
49
1.20
14300--14324
13
1.9
13
100
0
50
92
0
8
0
0.40
23188--23290
51
2.0
51
96
0
188
45
12
20
21
1.84
29634--29803
88
1.9
88
97
0
322
25
22
25
26
2.00
37273--37392
56
2.1
56
92
0
195
35
26
11
26
1.91
40555--40603
25
2.0
25
95
0
89
34
18
32
14
1.91
46716--46774
22
2.5
24
78
15
61
23
22
5
49
1.70

Tables:   1

The End!