Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016342.1 Corchorus olitorius cultivar O-4 contig16375, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12718

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
830--858
9
3.0
10
90
10
51
6
20
20
51
1.70
1207--1674
240
2.0
240
83
3
595
37
11
13
37
1.82
1446--2932
333
4.4
332
78
8
1370
34
14
16
34
1.89
3035--4164
311
3.5
320
77
7
861
34
13
16
35
1.87
10537--10577
16
2.4
18
88
8
59
29
0
2
68
1.03
11475--11507
13
2.4
14
90
10
59
33
15
0
51
1.43
11975--12006
15
2.1
15
94
0
55
28
21
31
18
1.97

Tables:   1

The End!