Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016349.1 Corchorus olitorius cultivar O-4 contig16382, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  85658

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
18289--18354
25
2.5
27
82
9
100
36
10
15
37
1.82
27765--27800
2
18.0
2
100
0
72
50
0
0
50
1.00
28847--28871
13
1.9
13
100
0
50
88
0
0
12
0.53
56482--56587
52
2.0
52
100
0
212
42
16
9
31
1.80
63999--64119
59
2.1
58
95
1
215
35
23
16
23
1.95
64157--64246
42
2.1
42
97
0
171
51
18
0
30
1.47
67138--67169
7
4.6
7
96
0
55
12
15
3
68
1.32
79522--79566
20
2.2
20
92
0
72
40
24
13
22
1.90
83249--83274
4
6.5
4
100
0
52
76
0
0
23
0.78

Tables:   1

The End!