Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016352.1 Corchorus olitorius cultivar O-4 contig16385, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11912

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2--1252
331
3.8
330
92
1
2000
34
15
13
36
1.87
7055--7121
21
3.2
21
66
16
57
49
14
5
29
1.68
7042--7122
42
1.9
42
94
0
144
45
16
7
30
1.74
8007--8065
10
6.0
10
75
11
59
55
1
0
42
1.09
8173--8197
12
2.1
12
100
0
50
24
20
16
40
1.91
9093--9729
322
2.0
314
82
6
764
39
14
13
32
1.85
9820--11630
335
5.4
329
78
7
1698
36
16
14
32
1.88

Tables:   1

The End!