Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016354.1 Corchorus olitorius cultivar O-4 contig16387, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  42469

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
143--185
14
3.1
14
90
6
70
41
32
9
16
1.80
144--182
20
2.0
20
89
0
60
43
35
5
15
1.69
12105--12138
1
34.0
1
100
0
68
0
0
0
100
0.00
13897--14020
45
2.8
45
97
0
230
31
21
25
20
1.98
15677--15745
15
4.4
15
77
10
75
36
56
1
5
1.32
15707--15734
6
4.7
6
100
0
56
46
53
0
0
1.00
15677--15726
21
2.4
21
82
0
64
34
58
2
6
1.34
15712--15758
21
2.2
21
84
0
58
42
51
0
6
1.27
41341--42469
340
3.4
331
86
4
1561
34
13
17
34
1.89

Tables:   1

The End!