Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016356.1 Corchorus olitorius cultivar O-4 contig16389, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22167

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2477--2542
32
2.1
31
86
10
91
39
6
19
34
1.77
3947--4126
98
1.8
98
90
0
288
41
18
3
36
1.69
9731--9769
20
2.0
20
100
0
78
46
0
7
46
1.31
10840--10873
17
1.9
17
88
5
50
52
5
20
20
1.67
14639--14677
21
1.9
21
89
5
62
25
20
23
30
1.98
21603--21632
11
2.7
11
94
0
51
20
6
0
73
1.05
22003--22051
2
24.5
2
82
0
62
42
0
8
48
1.32

Tables:   1

The End!