Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016358.1 Corchorus olitorius cultivar O-4 contig16391, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5544

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
285--1109
323
2.5
320
81
6
885
33
14
17
34
1.90
1163--1855
321
2.2
323
85
3
905
33
14
16
35
1.89
203--1921
874
2.0
876
89
3
2640
32
14
16
36
1.89
1963--2790
324
2.5
323
83
4
1038
34
14
17
33
1.90
1123--2726
805
2.0
796
93
1
2706
32
14
16
35
1.90
2718--2873
83
1.9
83
89
0
240
45
6
16
31
1.73
4705--5399
331
2.1
330
91
1
1133
32
16
15
34
1.91

Tables:   1

The End!