Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016366.1 Corchorus olitorius cultivar O-4 contig16399, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26353

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1719--1765
3
15.0
3
86
8
58
29
63
4
2
1.25
4646--4675
15
2.0
15
100
0
60
6
26
0
66
1.16
10948--11011
21
3.2
20
77
8
67
37
12
18
31
1.88
12879--12905
12
2.2
12
100
0
54
11
7
0
81
0.87
16845--16915
32
2.3
31
82
2
79
19
26
23
29
1.98
18662--18695
2
16.5
2
93
6
59
50
0
2
47
1.16
19440--19469
15
2.0
15
93
0
51
63
6
30
0
1.20
20804--20846
18
2.4
18
100
0
86
23
11
4
60
1.50

Tables:   1

The End!