Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016368.1 Corchorus olitorius cultivar O-4 contig16401, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17442

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1584--1859
35
7.8
35
82
4
340
32
17
10
40
1.83
1588--1652
19
3.6
18
72
14
62
35
15
9
40
1.79
1604--1859
142
1.8
142
89
1
406
32
16
10
40
1.82
1580--1860
107
2.7
105
82
6
325
32
17
9
40
1.82
2248--2355
38
2.9
37
86
8
150
32
13
7
46
1.71
2822--2963
55
2.7
51
81
17
166
38
14
5
42
1.69
2847--2960
55
2.1
55
88
6
169
39
13
5
42
1.66
6136--6184
25
2.0
24
96
4
89
20
0
18
61
1.35
6334--6375
21
2.0
21
95
0
75
54
26
0
19
1.44
12427--12492
6
11.5
6
80
9
75
33
18
0
48
1.48
12430--12488
9
6.6
9
88
0
82
33
18
0
47
1.49
12430--12491
15
4.1
15
87
0
88
33
19
0
46
1.50
12427--12492
21
3.1
21
91
0
96
33
18
0
48
1.48
13229--16962
332
11.3
331
80
5
3732
32
14
15
37
1.88

Tables:   1

The End!