Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016369.1 Corchorus olitorius cultivar O-4 contig16402, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12504

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4--3049
658
4.7
651
82
6
3428
33
14
17
34
1.90
4--3048
990
3.1
965
81
8
3402
33
14
17
34
1.90
5432--5500
24
2.6
27
77
15
81
10
18
18
52
1.73
6861--6899
2
19.5
2
94
0
69
46
2
0
51
1.14
10708--11128
219
1.9
220
83
2
551
36
15
15
31
1.90
10944--12500
655
2.4
634
81
7
1707
37
14
14
33
1.88

Tables:   1

The End!