Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016371.1 Corchorus olitorius cultivar O-4 contig16404, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24159

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--26
1
26.0
1
100
0
52
100
0
0
0
0.00
586--692
48
2.2
49
93
5
180
21
19
30
28
1.98
823--908
25
3.4
26
73
10
81
5
18
0
75
1.00
835--907
32
2.3
31
83
9
92
5
17
0
76
0.97
825--895
6
11.7
6
75
19
67
4
16
0
78
0.90
8966--9696
22
32.8
22
66
12
192
36
17
9
37
1.82
9172--9229
23
2.6
23
83
5
66
39
13
6
39
1.72
9383--9433
26
2.0
25
84
3
66
43
17
7
31
1.78
20872--20898
13
2.1
13
100
0
54
44
14
14
25
1.84
22836--22888
27
2.0
27
84
0
70
33
9
7
49
1.64
23103--23177
32
2.3
33
95
4
143
34
6
8
50
1.58

Tables:   1

The End!