Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016372.1 Corchorus olitorius cultivar O-4 contig16405, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  38393

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--40
2
20.0
2
100
0
80
50
0
0
50
1.00
2213--2248
18
2.0
18
94
0
63
27
19
11
41
1.85
4924--4985
32
2.0
32
87
3
90
38
20
11
29
1.88
8369--8473
55
1.9
55
88
3
158
26
22
14
36
1.93
12562--12589
14
2.0
14
100
0
56
21
7
7
64
1.43
16409--16443
11
3.2
11
87
0
52
80
11
2
5
1.00

Tables:   1

The End!