Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016375.1 Corchorus olitorius cultivar O-4 contig16408, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  54642

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--37
2
18.5
2
100
0
74
48
0
0
51
1.00
1171--1251
31
2.6
30
92
3
126
11
8
27
53
1.65
6131--6185
27
2.0
27
96
0
101
12
20
10
56
1.66
8438--8468
1
31.0
1
93
0
53
0
96
0
3
0.21
25573--25658
42
2.0
42
97
0
163
39
9
15
36
1.79
41700--41732
2
16.5
2
100
0
66
0
48
0
51
1.00
53535--54642
325
3.4
318
85
4
1424
35
17
14
33
1.90

Tables:   1

The End!