Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016393.1 Corchorus olitorius cultivar O-4 contig16426, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  58228

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13029--13066
20
1.9
20
88
0
58
44
7
5
42
1.56
23263--23310
20
2.3
22
78
14
64
35
22
10
31
1.88
23269--23310
20
2.1
20
90
0
66
33
23
11
30
1.91
26867--26920
24
2.2
24
75
18
58
77
7
11
3
1.09
49265--49295
2
15.5
2
100
0
62
48
0
0
51
1.00
50223--50264
3
14.0
3
100
0
84
66
0
0
33
0.92
50800--50840
2
20.5
2
100
0
82
51
0
0
48
1.00
54167--54203
19
1.9
19
94
0
65
29
18
13
37
1.90
58193--58227
2
17.5
2
100
0
70
51
0
0
48
1.00

Tables:   1

The End!