Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016396.1 Corchorus olitorius cultivar O-4 contig16429, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  81258

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
19491--19541
20
2.4
22
75
21
54
66
9
3
19
1.36
29520--29577
30
1.9
30
96
0
107
24
5
13
56
1.57
43517--43567
24
2.1
25
88
3
77
29
11
11
47
1.76
54379--54413
13
2.7
13
90
0
52
0
22
8
68
1.16
60926--60955
14
2.1
14
93
0
51
0
13
3
83
0.77
65136--65193
21
2.9
20
84
5
73
32
18
12
36
1.88
68407--68478
24
3.0
24
97
0
135
25
19
33
22
1.97

Tables:   1

The End!