Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016405.1 Corchorus olitorius cultivar O-4 contig16438, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  50062

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
810--840
3
10.0
3
93
6
53
0
32
0
67
0.91
35873--36006
67
2.0
67
100
0
268
52
14
19
13
1.75
45583--45665
34
2.3
35
83
6
96
49
13
8
28
1.71
45891--45926
2
18.0
2
100
0
72
50
0
0
50
1.00
47768--47828
28
2.2
28
77
19
65
6
26
6
60
1.46

Tables:   1

The End!