Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016409.1 Corchorus olitorius cultivar O-4 contig16442, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5930

Tables:   1   

This is table  1  of  1  ( 4 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1571--1641
30
2.4
31
83
4
83
42
22
11
23
1.86
4465--4583
29
4.1
29
95
1
204
37
21
21
18
1.94
4839--5043
35
5.9
35
92
0
347
24
20
20
33
1.97
5526--5551
2
13.0
2
100
0
52
50
0
0
50
1.00

Tables:   1

The End!