Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016412.1 Corchorus olitorius cultivar O-4 contig16445, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9062

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2794--2840
11
4.7
10
80
17
53
40
6
21
31
1.78
2805--2840
19
1.9
18
88
5
54
41
2
22
33
1.68
8500--8553
25
2.2
25
83
3
65
57
0
3
38
1.17
7943--8725
387
2.0
385
94
1
1372
44
3
8
43
1.53
9008--9055
6
8.5
6
86
11
66
52
0
10
37
1.36
9008--9055
22
2.1
23
92
3
80
52
0
10
37
1.36
9008--9055
16
2.9
16
84
9
62
52
0
10
37
1.36

Tables:   1

The End!