Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016426.1 Corchorus olitorius cultivar O-4 contig16459, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41950

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
14834--14919
3
28.7
3
100
0
172
33
0
0
66
0.92
16872--16908
18
2.1
19
90
10
60
21
24
0
54
1.45
23312--23337
6
4.3
6
100
0
52
84
0
0
15
0.62
24423--24472
3
16.7
3
85
8
57
70
6
0
24
1.10
24726--24752
7
3.9
7
100
0
54
44
0
0
55
0.99
25850--25874
4
6.2
4
100
0
50
0
24
0
76
0.80
33034--33064
15
2.1
15
100
0
62
12
6
6
74
1.21
33927--33961
17
2.0
18
88
5
54
51
0
0
48
1.00
35097--35143
22
2.1
22
100
0
94
31
0
27
40
1.57

Tables:   1

The End!