Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016437.1 Corchorus olitorius cultivar O-4 contig16470, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  80186

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9716--9746
16
2.0
15
93
6
53
22
12
38
25
1.90
14918--14949
7
4.6
7
100
0
64
31
43
12
12
1.80
39744--39787
22
2.0
21
86
4
61
56
6
6
29
1.51
51734--51790
21
2.7
21
83
10
80
36
5
5
52
1.47
61010--61039
6
5.0
6
100
0
60
33
16
50
0
1.46
69007--69069
29
2.2
29
82
0
72
42
15
22
19
1.88

Tables:   1

The End!