Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016439.1 Corchorus olitorius cultivar O-4 contig16472, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7861

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
673--761
44
2.0
44
88
0
133
32
25
28
13
1.94
592--952
126
2.8
128
82
4
476
32
23
29
13
1.93
928--998
35
2.0
35
83
0
88
30
22
26
19
1.98
4986--5035
25
2.0
25
100
0
100
40
8
8
44
1.63
5525--5599
34
2.2
35
92
2
134
22
36
2
38
1.69
5712--5765
28
1.9
29
85
14
78
50
16
25
7
1.71
5873--5909
7
5.4
7
87
6
58
16
13
10
59
1.61
5869--5908
20
2.0
20
100
0
80
20
10
10
60
1.57
6915--7169
129
2.0
128
90
3
406
25
9
12
53
1.67

Tables:   1

The End!