Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016452.1 Corchorus olitorius cultivar O-4 contig16485, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4731

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--487
31
16.7
30
78
13
361
32
13
20
33
1.91
1--2161
62
37.8
60
81
12
1983
31
13
21
34
1.92
97--2052
31
70.6
25
78
15
1196
30
13
21
34
1.92
1--2034
56
36.0
54
81
12
1652
30
13
21
34
1.92
1--2161
88
25.3
85
81
12
2072
31
13
21
34
1.92
180--307
66
1.9
66
95
0
229
35
10
20
32
1.87
599--2034
31
50.7
30
82
12
1469
30
13
21
34
1.92
1408--1517
16
7.1
16
66
17
70
32
14
19
33
1.92
1420--2034
15
43.1
14
61
25
84
30
14
21
33
1.93
2052--2161
31
3.5
31
96
0
193
31
12
16
39
1.86

Tables:   1

The End!