Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016466.1 Corchorus olitorius cultivar O-4 contig16499, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34832

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5431--5460
14
2.1
14
93
6
51
56
0
0
43
0.99
6696--6732
17
2.1
18
85
14
51
59
0
5
35
1.20
20495--20610
62
1.9
60
92
3
196
40
9
6
43
1.64
21243--21281
16
2.3
17
91
8
62
56
23
7
12
1.62
28942--28984
14
3.1
14
80
6
52
6
18
11
62
1.50
31873--31899
1
27.0
1
100
0
54
0
0
0
100
0.00
34784--34832
3
16.0
3
95
4
89
67
0
0
32
0.91

Tables:   1

The End!