Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016480.1 Corchorus olitorius cultivar O-4 contig16513, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  50282

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15703--15747
24
1.9
23
86
4
63
51
26
17
4
1.65
21894--21922
2
15.0
2
92
7
51
51
0
0
48
1.00
22094--22118
2
12.5
2
100
0
50
48
0
0
52
1.00
26561--26596
6
6.0
6
90
0
54
27
0
52
19
1.46
26560--26595
18
2.0
18
94
0
63
25
0
52
22
1.47
37175--37199
13
1.9
13
100
0
50
88
0
0
12
0.53
37772--37805
17
2.0
17
94
0
59
23
38
5
32
1.79
37873--37905
16
2.0
17
94
5
59
24
36
6
33
1.80
48436--48478
2
22.0
2
95
4
79
51
0
0
48
1.00
48618--48733
57
2.0
57
91
3
189
34
21
1
42
1.63
48799--48879
42
1.9
42
94
0
144
29
7
17
45
1.75
50087--50123
2
18.5
2
100
0
74
48
0
0
51
1.00

Tables:   1

The End!