Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016486.1 Corchorus olitorius cultivar O-4 contig16519, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4562

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--2398
324
7.4
323
86
4
3196
33
13
16
35
1.89
1930--1963
11
3.0
11
87
8
50
58
2
17
20
1.51
2136--2659
261
2.0
261
88
0
771
34
11
16
37
1.85
2397--4562
324
6.7
322
88
3
3070
34
13
17
34
1.89
1487--3308
910
2.0
910
89
2
2802
33
13
17
35
1.89

Tables:   1

The End!