Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016499.1 Corchorus olitorius cultivar O-4 contig16532, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19245

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4519--5041
261
2.0
261
95
0
940
29
19
21
29
1.97
6100--6177
27
2.8
28
77
11
79
38
8
14
38
1.77
6103--6186
28
3.0
28
72
17
77
36
9
13
40
1.77
8630--8666
19
1.9
19
88
0
56
75
0
18
5
0.99
17597--17625
14
2.1
14
100
0
58
44
27
0
27
1.54

Tables:   1

The End!