Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016518.1 Corchorus olitorius cultivar O-4 contig16551, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34980

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
744--6441
323
17.5
322
76
9
4138
35
16
14
32
1.90
768--6411
979
5.8
959
77
10
4587
35
16
15
32
1.90
6456--6529
32
2.3
33
90
6
118
24
12
10
52
1.70
16090--16162
36
2.0
36
97
0
137
34
17
16
31
1.93
17858--17890
16
2.1
16
100
0
66
36
6
24
33
1.80
23450--23496
24
2.0
24
83
8
60
51
4
4
40
1.41
31511--31544
17
2.0
17
100
0
68
41
23
17
17
1.90

Tables:   1

The End!