Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016523.1 Corchorus olitorius cultivar O-4 contig16556, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30944

Tables:   1   

This is table  1  of  1  ( 4 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2104--2129
2
13.0
2
100
0
52
50
0
50
0
1.00
13468--13497
15
2.0
15
100
0
60
40
13
0
46
1.43
21257--21299
18
2.4
18
77
14
52
0
2
39
58
1.11
29376--29403
12
2.3
12
100
0
56
35
7
14
42
1.73

Tables:   1

The End!