Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016525.1 Corchorus olitorius cultivar O-4 contig16558, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23601

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11534--11567
15
2.3
15
90
5
52
88
2
8
0
0.62
12735--12773
19
2.1
19
100
0
78
33
20
15
30
1.94
12957--13025
31
2.2
31
79
7
77
37
15
8
37
1.79
13962--14000
18
2.2
18
90
4
62
56
2
5
35
1.35
16960--16986
13
2.1
13
100
0
54
7
14
11
66
1.43
22146--22352
103
2.0
103
99
0
405
49
7
14
27
1.71

Tables:   1

The End!