Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016532.1 Corchorus olitorius cultivar O-4 contig16565, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  78575

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5762--5823
32
1.9
32
96
0
115
19
6
38
35
1.77
34353--34397
23
2.0
23
86
0
63
24
6
24
44
1.77
46319--46530
70
3.0
70
97
0
406
28
28
14
27
1.95
50350--50551
102
2.0
102
99
0
395
23
17
17
41
1.90
58179--58212
10
3.5
10
88
8
52
0
11
0
88
0.52
61582--61606
6
4.2
6
100
0
50
16
52
0
32
1.44
75407--75433
2
13.5
2
100
0
54
51
0
0
48
1.00
78092--78169
31
2.5
31
97
0
147
32
21
11
34
1.89

Tables:   1

The End!