Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016538.1 Corchorus olitorius cultivar O-4 contig16571, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8294

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4414--4442
14
2.0
15
93
6
51
0
24
0
75
0.80
4420--4467
25
1.9
25
83
8
62
6
20
2
70
1.19
4977--5236
104
2.5
106
89
4
388
39
8
9
42
1.67
6888--6920
15
2.2
15
89
10
50
57
6
36
0
1.23
7409--7724
108
2.9
108
85
6
431
43
6
10
38
1.66

Tables:   1

The End!