Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016560.1 Corchorus olitorius cultivar O-4 contig16593, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34521

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3684--3743
29
2.1
29
100
0
120
30
13
16
40
1.87
6620--6757
60
2.3
58
84
8
170
39
17
12
30
1.86
6658--6767
31
3.6
31
69
16
86
39
20
14
26
1.91
15872--15901
13
2.2
14
94
5
53
63
16
6
13
1.50
20742--20770
14
2.1
14
100
0
58
51
0
20
27
1.47
21736--21770
17
2.1
17
100
0
70
34
11
11
42
1.77
32613--32777
27
6.1
27
85
0
204
20
28
7
44
1.78

Tables:   1

The End!