Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016565.1 Corchorus olitorius cultivar O-4 contig16598, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11467

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1026--1067
14
3.1
14
80
13
52
54
2
2
40
1.26
2861--2899
20
2.0
20
100
0
78
23
30
10
35
1.88
3530--3583
11
4.5
12
78
17
58
37
0
3
59
1.15
3535--3584
13
3.9
14
82
15
63
36
0
2
62
1.07
7567--7593
12
2.2
12
100
0
54
40
22
14
22
1.90
8760--8822
24
2.8
21
77
15
63
68
4
12
14
1.36

Tables:   1

The End!