Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016566.1 Corchorus olitorius cultivar O-4 contig16599, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22628

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4158--4295
31
4.5
31
80
10
160
22
21
23
33
1.97
8248--8291
22
2.0
22
86
0
61
54
0
2
43
1.12
8383--8410
6
4.7
6
100
0
56
17
14
67
0
1.22
10768--10806
17
2.3
17
86
8
53
56
0
0
43
0.99
10767--10808
9
4.7
9
80
19
52
54
0
0
45
0.99
12493--12559
32
2.1
32
100
0
134
31
14
22
31
1.94
14393--14477
43
2.0
43
100
0
170
25
21
17
35
1.95
19783--19817
3
11.7
3
100
0
70
0
31
0
68
0.90
22590--22626
2
19.0
2
94
5
67
48
0
0
51
1.00

Tables:   1

The End!