Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016582.1 Corchorus olitorius cultivar O-4 contig16615, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17817

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5670--5712
5
8.4
5
87
5
50
55
0
39
4
1.20
6257--6291
5
7.0
5
93
0
61
2
37
0
60
1.12
6247--6282
15
2.4
15
90
0
54
5
38
0
55
1.23
9157--9196
21
1.9
21
89
0
62
27
35
35
2
1.71
12176--12235
27
2.2
27
85
5
77
58
0
30
11
1.34
12476--12561
42
2.1
42
86
4
122
51
19
13
15
1.77
14005--14045
20
2.0
20
100
0
82
29
9
9
51
1.67
15648--15720
29
2.4
30
81
6
85
45
1
53
0
1.09

Tables:   1

The End!