Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016592.1 Corchorus olitorius cultivar O-4 contig16625, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  73105

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--1169
334
3.5
330
78
8
1156
35
15
14
34
1.89
12387--12456
29
2.4
29
85
2
86
37
28
12
21
1.90
24395--24421
4
6.8
4
100
0
54
74
0
25
0
0.83
31174--31319
72
2.0
72
94
0
256
41
19
12
27
1.87
35915--36029
2
61.5
2
71
19
70
46
0
2
51
1.15
35846--35898
23
2.4
21
76
14
52
45
0
1
52
1.11
37817--37856
10
3.9
10
84
15
55
0
15
2
82
0.77
39393--39431
6
6.5
6
87
0
51
17
15
28
38
1.91
39393--39431
12
3.2
12
85
0
60
17
15
28
38
1.91
39393--39431
18
2.2
18
95
0
69
17
15
28
38
1.91
43126--43157
7
4.6
7
100
0
64
12
12
43
31
1.80
50467--50510
7
6.3
7
100
0
88
43
15
13
27
1.85
64610--64634
6
4.2
6
100
0
50
0
0
32
68
0.90

Tables:   1

The End!