Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016596.1 Corchorus olitorius cultivar O-4 contig16629, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35617

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4183--4255
30
2.4
31
95
2
130
41
10
0
47
1.39
18246--18322
40
1.9
40
84
5
102
48
11
14
25
1.78
18454--19113
76
8.8
76
89
2
891
38
12
24
24
1.90
19264--19401
69
2.0
69
94
0
240
49
23
13
13
1.77
21864--22054
92
2.1
93
93
1
330
39
18
17
24
1.92
22186--22214
2
14.5
2
100
0
58
51
0
0
48
1.00
24264--24302
14
2.8
14
88
7
53
23
10
2
64
1.37
24203--24373
85
2.0
85
93
0
288
32
12
2
52
1.53
26360--26409
25
2.0
25
92
0
82
12
32
20
36
1.89
26406--26447
21
2.0
21
86
9
59
47
33
0
19
1.49

Tables:   1

The End!