Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016612.1 Corchorus olitorius cultivar O-4 contig16645, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13147

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1740--1925
33
5.6
33
77
6
198
43
23
8
25
1.81
1740--1932
66
2.9
67
90
3
302
42
22
8
26
1.82
2191--2262
31
2.3
31
97
0
135
37
29
18
15
1.91
4397--4488
21
4.4
21
95
2
159
26
27
18
28
1.98
4716--4761
21
2.2
21
84
0
56
23
21
19
34
1.96
4769--4902
21
6.4
21
91
1
207
24
26
19
29
1.98

Tables:   1

The End!